Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.37■□□□□ 0.53
Rb1P13405 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.37■□□□□ 0.53
Rb1P13405 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Rb1P13405 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rb1P13405 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.37■□□□□ 0.53
Rb1P13405 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rb1P13405 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.36■□□□□ 0.53
Rb1P13405 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rb1P13405 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rb1P13405 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Rb1P13405 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rb1P13405 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.35■□□□□ 0.53
Rb1P13405 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
Rb1P13405 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.35■□□□□ 0.53
Rb1P13405 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.35■□□□□ 0.53
Rb1P13405 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rb1P13405 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.35■□□□□ 0.53
Rb1P13405 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.35■□□□□ 0.53
Rb1P13405 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rb1P13405 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rb1P13405 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.34■□□□□ 0.53
Rb1P13405 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.34■□□□□ 0.53
Rb1P13405 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Rb1P13405 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rb1P13405 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rb1P13405 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Rb1P13405 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.33■□□□□ 0.53
Rb1P13405 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.33■□□□□ 0.53
Rb1P13405 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.33■□□□□ 0.53
Rb1P13405 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rb1P13405 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.33■□□□□ 0.52
Rb1P13405 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rb1P13405 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rb1P13405 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Gm715-201ENSMUST00000117865 831 ntBASIC18.32■□□□□ 0.52
Rb1P13405 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.32■□□□□ 0.52
Rb1P13405 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rb1P13405 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms