Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.01■□□□□ 0.15
Ccl3P10855 Gm27463-201ENSMUST00000183569 57 ntBASIC16.01■□□□□ 0.15
Ccl3P10855 Gm10517-202ENSMUST00000192970 758 ntBASIC16.01■□□□□ 0.15
Ccl3P10855 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ccl3P10855 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccl3P10855 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccl3P10855 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.01■□□□□ 0.15
Ccl3P10855 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccl3P10855 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccl3P10855 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccl3P10855 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ccl3P10855 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ccl3P10855 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccl3P10855 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccl3P10855 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16■□□□□ 0.15
Ccl3P10855 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccl3P10855 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ccl3P10855 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccl3P10855 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.99■□□□□ 0.15
Ccl3P10855 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ccl3P10855 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccl3P10855 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccl3P10855 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Gm45058-201ENSMUST00000205810 766 ntBASIC15.98■□□□□ 0.15
Ccl3P10855 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccl3P10855 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccl3P10855 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccl3P10855 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.97■□□□□ 0.15
Ccl3P10855 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccl3P10855 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.97■□□□□ 0.15
Ccl3P10855 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Gm23634-201ENSMUST00000175071 91 ntBASIC15.97■□□□□ 0.15
Ccl3P10855 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ccl3P10855 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.97■□□□□ 0.15
Ccl3P10855 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccl3P10855 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ccl3P10855 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccl3P10855 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccl3P10855 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccl3P10855 Gm10013-201ENSMUST00000106074 672 ntBASIC15.96■□□□□ 0.15
Ccl3P10855 Gm38027-201ENSMUST00000192315 235 ntBASIC15.96■□□□□ 0.15
Ccl3P10855 Gm18032-201ENSMUST00000222541 538 ntBASIC15.96■□□□□ 0.15
Ccl3P10855 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccl3P10855 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccl3P10855 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.96■□□□□ 0.15
Ccl3P10855 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccl3P10855 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccl3P10855 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Ccl3P10855 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ccl3P10855 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccl3P10855 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ccl3P10855 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Ccl3P10855 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Ccl3P10855 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.95■□□□□ 0.14
Ccl3P10855 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccl3P10855 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
Ccl3P10855 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccl3P10855 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms