Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Surf1P09925 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Gm12441-201ENSMUST00000121806 588 ntBASIC20.38■□□□□ 0.85
Surf1P09925 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.38■□□□□ 0.85
Surf1P09925 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.38■□□□□ 0.85
Surf1P09925 Gm4968-201ENSMUST00000071458 858 ntBASIC20.38■□□□□ 0.85
Surf1P09925 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Surf1P09925 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Surf1P09925 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.38■□□□□ 0.85
Surf1P09925 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Surf1P09925 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf1P09925 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Surf1P09925 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.37■□□□□ 0.85
Surf1P09925 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf1P09925 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Surf1P09925 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Surf1P09925 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.36■□□□□ 0.85
Surf1P09925 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.36■□□□□ 0.85
Surf1P09925 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.36■□□□□ 0.85
Surf1P09925 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.36■□□□□ 0.85
Surf1P09925 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf1P09925 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Surf1P09925 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.35■□□□□ 0.85
Surf1P09925 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Surf1P09925 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Surf1P09925 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.35■□□□□ 0.85
Surf1P09925 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf1P09925 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
Surf1P09925 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.34■□□□□ 0.85
Surf1P09925 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.34■□□□□ 0.85
Surf1P09925 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.34■□□□□ 0.85
Surf1P09925 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Surf1P09925 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.34■□□□□ 0.85
Surf1P09925 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.34■□□□□ 0.85
Surf1P09925 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf1P09925 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.33■□□□□ 0.85
Surf1P09925 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf1P09925 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Surf1P09925 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf1P09925 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Surf1P09925 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf1P09925 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Surf1P09925 Gm26524-201ENSMUST00000192339 390 ntBASIC20.33■□□□□ 0.85
Surf1P09925 Rab3c-203ENSMUST00000224180 967 ntBASIC20.33■□□□□ 0.85
Surf1P09925 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf1P09925 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Surf1P09925 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Surf1P09925 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Surf1P09925 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Surf1P09925 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Surf1P09925 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.33■□□□□ 0.84
Surf1P09925 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Surf1P09925 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf1P09925 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.32■□□□□ 0.84
Surf1P09925 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.32■□□□□ 0.84
Surf1P09925 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf1P09925 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf1P09925 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf1P09925 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Surf1P09925 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Surf1P09925 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf1P09925 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Surf1P09925 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.31■□□□□ 0.84
Surf1P09925 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms