Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.25■□□□□ 0.51
PdgfrbP05622 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Gm10602-201ENSMUST00000098239 609 ntBASIC18.25■□□□□ 0.51
PdgfrbP05622 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.25■□□□□ 0.51
PdgfrbP05622 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PdgfrbP05622 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.25■□□□□ 0.51
PdgfrbP05622 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
PdgfrbP05622 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PdgfrbP05622 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PdgfrbP05622 Gm5408-201ENSMUST00000197998 747 ntBASIC18.24■□□□□ 0.51
PdgfrbP05622 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.24■□□□□ 0.51
PdgfrbP05622 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PdgfrbP05622 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.23■□□□□ 0.51
PdgfrbP05622 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PdgfrbP05622 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PdgfrbP05622 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Rab3c-203ENSMUST00000224180 967 ntBASIC18.22■□□□□ 0.51
PdgfrbP05622 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PdgfrbP05622 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.22■□□□□ 0.51
PdgfrbP05622 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.22■□□□□ 0.51
PdgfrbP05622 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PdgfrbP05622 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Rarb-207ENSMUST00000225921 2756 ntBASIC18.21■□□□□ 0.51
PdgfrbP05622 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.21■□□□□ 0.51
PdgfrbP05622 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.21■□□□□ 0.51
PdgfrbP05622 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.21■□□□□ 0.51
PdgfrbP05622 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PdgfrbP05622 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
PdgfrbP05622 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PdgfrbP05622 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.2■□□□□ 0.5
PdgfrbP05622 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.2■□□□□ 0.5
PdgfrbP05622 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PdgfrbP05622 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PdgfrbP05622 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.19■□□□□ 0.5
PdgfrbP05622 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PdgfrbP05622 Gm44549-201ENSMUST00000208351 577 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms