Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrnpP04925 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PrnpP04925 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PrnpP04925 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PrnpP04925 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.78■□□□□ 0.6
PrnpP04925 Gm10517-202ENSMUST00000192970 758 ntBASIC18.78■□□□□ 0.6
PrnpP04925 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.78■□□□□ 0.6
PrnpP04925 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PrnpP04925 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PrnpP04925 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrnpP04925 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.77■□□□□ 0.6
PrnpP04925 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrnpP04925 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrnpP04925 Gm12085-201ENSMUST00000119263 940 ntBASIC18.77■□□□□ 0.6
PrnpP04925 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PrnpP04925 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.77■□□□□ 0.6
PrnpP04925 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PrnpP04925 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PrnpP04925 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.76■□□□□ 0.59
PrnpP04925 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PrnpP04925 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PrnpP04925 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PrnpP04925 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.75■□□□□ 0.59
PrnpP04925 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PrnpP04925 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PrnpP04925 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PrnpP04925 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PrnpP04925 Gm21362-201ENSMUST00000194272 928 ntBASIC18.74■□□□□ 0.59
PrnpP04925 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.74■□□□□ 0.59
PrnpP04925 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PrnpP04925 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PrnpP04925 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PrnpP04925 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.73■□□□□ 0.59
PrnpP04925 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.73■□□□□ 0.59
PrnpP04925 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.73■□□□□ 0.59
PrnpP04925 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PrnpP04925 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PrnpP04925 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.72■□□□□ 0.59
PrnpP04925 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.72■□□□□ 0.59
PrnpP04925 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.72■□□□□ 0.59
PrnpP04925 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.72■□□□□ 0.59
PrnpP04925 Gm38027-201ENSMUST00000192315 235 ntBASIC18.72■□□□□ 0.59
PrnpP04925 Gm45058-201ENSMUST00000205810 766 ntBASIC18.72■□□□□ 0.59
PrnpP04925 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.72■□□□□ 0.59
PrnpP04925 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PrnpP04925 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.72■□□□□ 0.59
PrnpP04925 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PrnpP04925 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PrnpP04925 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PrnpP04925 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms