Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
P04224 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
P04224 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
P04224 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.84■□□□□ 0.13
P04224 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.84■□□□□ 0.13
P04224 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.84■□□□□ 0.13
P04224 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
P04224 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
P04224 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
P04224 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
P04224 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
P04224 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
P04224 Gm12922-201ENSMUST00000120626 809 ntBASIC15.83■□□□□ 0.12
P04224 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.83■□□□□ 0.12
P04224 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
P04224 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
P04224 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
P04224 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
P04224 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
P04224 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
P04224 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
P04224 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
P04224 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
P04224 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.81■□□□□ 0.12
P04224 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.81■□□□□ 0.12
P04224 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
P04224 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.8■□□□□ 0.12
P04224 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
P04224 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
P04224 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
P04224 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.8■□□□□ 0.12
P04224 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
P04224 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
P04224 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
P04224 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
P04224 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms