Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NgfP01139 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
NgfP01139 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NgfP01139 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.01■□□□□ 0.15
NgfP01139 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 BC021767-201ENSMUST00000126387 1716 ntBASIC16.01■□□□□ 0.15
NgfP01139 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NgfP01139 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16■□□□□ 0.15
NgfP01139 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16■□□□□ 0.15
NgfP01139 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NgfP01139 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16■□□□□ 0.15
NgfP01139 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16■□□□□ 0.15
NgfP01139 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NgfP01139 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.99■□□□□ 0.15
NgfP01139 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.99■□□□□ 0.15
NgfP01139 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NgfP01139 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.99■□□□□ 0.15
NgfP01139 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Gm10517-202ENSMUST00000192970 758 ntBASIC15.99■□□□□ 0.15
NgfP01139 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NgfP01139 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NgfP01139 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NgfP01139 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
NgfP01139 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NgfP01139 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.98■□□□□ 0.15
NgfP01139 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NgfP01139 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.98■□□□□ 0.15
NgfP01139 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NgfP01139 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NgfP01139 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NgfP01139 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
NgfP01139 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
NgfP01139 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.97■□□□□ 0.15
NgfP01139 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.97■□□□□ 0.15
NgfP01139 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.97■□□□□ 0.15
NgfP01139 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.97■□□□□ 0.15
NgfP01139 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NgfP01139 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NgfP01139 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NgfP01139 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.96■□□□□ 0.15
NgfP01139 Gm27463-201ENSMUST00000183569 57 ntBASIC15.96■□□□□ 0.15
NgfP01139 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NgfP01139 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NgfP01139 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms