Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CopeO89079 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CopeO89079 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CopeO89079 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CopeO89079 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CopeO89079 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CopeO89079 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CopeO89079 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CopeO89079 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CopeO89079 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopeO89079 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopeO89079 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CopeO89079 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CopeO89079 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.66■□□□□ 0.58
CopeO89079 Gm43017-201ENSMUST00000198296 752 ntBASIC18.66■□□□□ 0.58
CopeO89079 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.66■□□□□ 0.58
CopeO89079 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopeO89079 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CopeO89079 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.66■□□□□ 0.58
CopeO89079 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CopeO89079 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CopeO89079 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.66■□□□□ 0.58
CopeO89079 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CopeO89079 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
CopeO89079 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.65■□□□□ 0.58
CopeO89079 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CopeO89079 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.65■□□□□ 0.58
CopeO89079 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CopeO89079 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.64■□□□□ 0.57
CopeO89079 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CopeO89079 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CopeO89079 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.64■□□□□ 0.57
CopeO89079 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.64■□□□□ 0.57
CopeO89079 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CopeO89079 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CopeO89079 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.63■□□□□ 0.57
CopeO89079 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.63■□□□□ 0.57
CopeO89079 Gm43060-201ENSMUST00000200621 289 ntBASIC18.63■□□□□ 0.57
CopeO89079 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.63■□□□□ 0.57
CopeO89079 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.63■□□□□ 0.57
CopeO89079 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CopeO89079 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Gm8969-201ENSMUST00000199694 526 ntBASIC18.62■□□□□ 0.57
CopeO89079 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.62■□□□□ 0.57
CopeO89079 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CopeO89079 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.61■□□□□ 0.57
CopeO89079 Gm45417-201ENSMUST00000209533 758 ntBASIC18.61■□□□□ 0.57
CopeO89079 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.61■□□□□ 0.57
CopeO89079 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CopeO89079 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms