Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Matn4O89029 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Matn4O89029 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.07■□□□□ 0.32
Matn4O89029 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.07■□□□□ 0.32
Matn4O89029 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.07■□□□□ 0.32
Matn4O89029 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Matn4O89029 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.06■□□□□ 0.32
Matn4O89029 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Matn4O89029 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Matn4O89029 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.05■□□□□ 0.32
Matn4O89029 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.05■□□□□ 0.32
Matn4O89029 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.05■□□□□ 0.32
Matn4O89029 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.05■□□□□ 0.32
Matn4O89029 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.05■□□□□ 0.32
Matn4O89029 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Matn4O89029 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.05■□□□□ 0.32
Matn4O89029 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Matn4O89029 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Matn4O89029 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
Matn4O89029 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Matn4O89029 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.04■□□□□ 0.32
Matn4O89029 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.04■□□□□ 0.32
Matn4O89029 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.04■□□□□ 0.32
Matn4O89029 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Matn4O89029 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Matn4O89029 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Matn4O89029 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.03■□□□□ 0.32
Matn4O89029 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.03■□□□□ 0.32
Matn4O89029 Gm13234-201ENSMUST00000120010 747 ntBASIC17.03■□□□□ 0.32
Matn4O89029 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.03■□□□□ 0.32
Matn4O89029 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.03■□□□□ 0.32
Matn4O89029 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Matn4O89029 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Matn4O89029 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Matn4O89029 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms