Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.6■□□□□ 0.57
Syn1O88935 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.6■□□□□ 0.57
Syn1O88935 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Syn1O88935 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Syn1O88935 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.6■□□□□ 0.57
Syn1O88935 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Syn1O88935 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.59■□□□□ 0.57
Syn1O88935 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.59■□□□□ 0.57
Syn1O88935 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.59■□□□□ 0.57
Syn1O88935 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Syn1O88935 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Syn1O88935 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Syn1O88935 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.58■□□□□ 0.57
Syn1O88935 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Syn1O88935 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Syn1O88935 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Syn1O88935 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Syn1O88935 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.58■□□□□ 0.56
Syn1O88935 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Gm43514-201ENSMUST00000198852 424 ntBASIC18.57■□□□□ 0.56
Syn1O88935 Mzt1-203ENSMUST00000227948 952 ntBASIC18.57■□□□□ 0.56
Syn1O88935 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Syn1O88935 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Syn1O88935 Gm18669-201ENSMUST00000216049 778 ntBASIC18.56■□□□□ 0.56
Syn1O88935 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Syn1O88935 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Syn1O88935 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Syn1O88935 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.55■□□□□ 0.56
Syn1O88935 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.55■□□□□ 0.56
Syn1O88935 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.55■□□□□ 0.56
Syn1O88935 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Syn1O88935 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Syn1O88935 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Syn1O88935 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Syn1O88935 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms