Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Hcn3O88705 Gm26833-201ENSMUST00000180899 440 ntBASIC17.29■□□□□ 0.36
Hcn3O88705 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hcn3O88705 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Hcn3O88705 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hcn3O88705 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hcn3O88705 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hcn3O88705 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hcn3O88705 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hcn3O88705 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hcn3O88705 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn3O88705 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hcn3O88705 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.27■□□□□ 0.35
Hcn3O88705 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn3O88705 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn3O88705 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hcn3O88705 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Hcn3O88705 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.26■□□□□ 0.35
Hcn3O88705 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hcn3O88705 Gm11421-201ENSMUST00000122124 294 ntBASIC17.26■□□□□ 0.35
Hcn3O88705 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.26■□□□□ 0.35
Hcn3O88705 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.26■□□□□ 0.35
Hcn3O88705 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.26■□□□□ 0.35
Hcn3O88705 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.26■□□□□ 0.35
Hcn3O88705 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hcn3O88705 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hcn3O88705 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hcn3O88705 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.25■□□□□ 0.35
Hcn3O88705 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Hcn3O88705 Gm7860-201ENSMUST00000121190 879 ntBASIC17.25■□□□□ 0.35
Hcn3O88705 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hcn3O88705 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hcn3O88705 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Hcn3O88705 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hcn3O88705 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.24■□□□□ 0.35
Hcn3O88705 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hcn3O88705 Gm40848-201ENSMUST00000221998 324 ntBASIC17.24■□□□□ 0.35
Hcn3O88705 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hcn3O88705 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hcn3O88705 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms