Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClppO88696 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ClppO88696 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ClppO88696 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ClppO88696 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.55■□□□□ 0.4
ClppO88696 Gm18666-201ENSMUST00000190039 958 ntBASIC17.55■□□□□ 0.4
ClppO88696 Gm10252-201ENSMUST00000209541 832 ntBASIC17.55■□□□□ 0.4
ClppO88696 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ClppO88696 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClppO88696 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ClppO88696 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.54■□□□□ 0.4
ClppO88696 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ClppO88696 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.54■□□□□ 0.4
ClppO88696 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.54■□□□□ 0.4
ClppO88696 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Gm27275-201ENSMUST00000184318 272 ntBASIC17.54■□□□□ 0.4
ClppO88696 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.54■□□□□ 0.4
ClppO88696 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClppO88696 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.53■□□□□ 0.4
ClppO88696 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ClppO88696 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ClppO88696 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ClppO88696 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ClppO88696 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClppO88696 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.52■□□□□ 0.4
ClppO88696 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
ClppO88696 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
ClppO88696 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ClppO88696 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClppO88696 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.52■□□□□ 0.39
ClppO88696 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClppO88696 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.51■□□□□ 0.39
ClppO88696 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.51■□□□□ 0.39
ClppO88696 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
ClppO88696 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClppO88696 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ClppO88696 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.5■□□□□ 0.39
ClppO88696 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ClppO88696 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ClppO88696 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClppO88696 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
ClppO88696 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClppO88696 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms