Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.06
Cldn1O88551 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cldn1O88551 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cldn1O88551 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Cldn1O88551 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cldn1O88551 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
Cldn1O88551 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Gm13559-201ENSMUST00000120476 863 ntBASIC15.45■□□□□ 0.06
Cldn1O88551 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.45■□□□□ 0.06
Cldn1O88551 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Cldn1O88551 Gm27741-201ENSMUST00000185060 237 ntBASIC15.45■□□□□ 0.06
Cldn1O88551 Gm21814-202ENSMUST00000203277 873 ntBASIC15.45■□□□□ 0.06
Cldn1O88551 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.45■□□□□ 0.06
Cldn1O88551 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.45■□□□□ 0.06
Cldn1O88551 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Cldn1O88551 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.45■□□□□ 0.06
Cldn1O88551 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cldn1O88551 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
Cldn1O88551 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cldn1O88551 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cldn1O88551 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.44■□□□□ 0.06
Cldn1O88551 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.44■□□□□ 0.06
Cldn1O88551 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cldn1O88551 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cldn1O88551 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Flg-201ENSMUST00000050758 1488 ntBASIC15.44■□□□□ 0.06
Cldn1O88551 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cldn1O88551 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.43■□□□□ 0.06
Cldn1O88551 Gm11539-201ENSMUST00000119837 557 ntBASIC15.43■□□□□ 0.06
Cldn1O88551 Gm13436-201ENSMUST00000120418 567 ntBASIC15.43■□□□□ 0.06
Cldn1O88551 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.43■□□□□ 0.06
Cldn1O88551 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.43■□□□□ 0.06
Cldn1O88551 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.43■□□□□ 0.06
Cldn1O88551 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.43■□□□□ 0.06
Cldn1O88551 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cldn1O88551 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cldn1O88551 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Gm7889-201ENSMUST00000185591 958 ntBASIC15.42■□□□□ 0.06
Cldn1O88551 Gm43183-201ENSMUST00000200632 547 ntBASIC15.42■□□□□ 0.06
Cldn1O88551 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.42■□□□□ 0.06
Cldn1O88551 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.42■□□□□ 0.06
Cldn1O88551 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cldn1O88551 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cldn1O88551 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.41■□□□□ 0.06
Cldn1O88551 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.41■□□□□ 0.06
Cldn1O88551 Mtag2-201ENSMUST00000058665 714 ntBASIC15.41■□□□□ 0.06
Cldn1O88551 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cldn1O88551 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms