Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cxcr3O88410 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Cxcr3O88410 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cxcr3O88410 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cxcr3O88410 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.14■□□□□ 0.49
Cxcr3O88410 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.14■□□□□ 0.49
Cxcr3O88410 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcr3O88410 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Cxcr3O88410 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.13■□□□□ 0.49
Cxcr3O88410 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cxcr3O88410 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.13■□□□□ 0.49
Cxcr3O88410 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Gm27275-201ENSMUST00000184318 272 ntBASIC18.13■□□□□ 0.49
Cxcr3O88410 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cxcr3O88410 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.13■□□□□ 0.49
Cxcr3O88410 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcr3O88410 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cxcr3O88410 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cxcr3O88410 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Cxcr3O88410 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cxcr3O88410 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcr3O88410 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.12■□□□□ 0.49
Cxcr3O88410 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cxcr3O88410 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cxcr3O88410 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.11■□□□□ 0.49
Cxcr3O88410 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.11■□□□□ 0.49
Cxcr3O88410 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cxcr3O88410 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcr3O88410 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cxcr3O88410 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cxcr3O88410 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cxcr3O88410 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.1■□□□□ 0.49
Cxcr3O88410 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cxcr3O88410 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cxcr3O88410 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcr3O88410 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.09■□□□□ 0.49
Cxcr3O88410 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Gm11927-201ENSMUST00000118472 759 ntBASIC18.09■□□□□ 0.49
Cxcr3O88410 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cxcr3O88410 Zfp783-201ENSMUST00000095946 670 ntBASIC18.09■□□□□ 0.49
Cxcr3O88410 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cxcr3O88410 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcr3O88410 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcr3O88410 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcr3O88410 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcr3O88410 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms