Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.2■□□□□ 0.34
Tgfbr3O88393 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.2■□□□□ 0.34
Tgfbr3O88393 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tgfbr3O88393 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tgfbr3O88393 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tgfbr3O88393 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Mir2861-201ENSMUST00000175539 82 ntBASIC17.17■□□□□ 0.34
Tgfbr3O88393 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tgfbr3O88393 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tgfbr3O88393 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tgfbr3O88393 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tgfbr3O88393 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Tgfbr3O88393 Gm7367-201ENSMUST00000057611 492 ntBASIC17.16■□□□□ 0.34
Tgfbr3O88393 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tgfbr3O88393 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tgfbr3O88393 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tgfbr3O88393 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tgfbr3O88393 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gm18959-201ENSMUST00000208954 655 ntBASIC17.15■□□□□ 0.34
Tgfbr3O88393 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tgfbr3O88393 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tgfbr3O88393 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Gm12085-201ENSMUST00000119263 940 ntBASIC17.14■□□□□ 0.33
Tgfbr3O88393 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.14■□□□□ 0.33
Tgfbr3O88393 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.14■□□□□ 0.33
Tgfbr3O88393 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tgfbr3O88393 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tgfbr3O88393 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms