Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr1O70481 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ubr1O70481 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC23.63■■□□□ 1.37
Ubr1O70481 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Gm6345-202ENSMUST00000180900 204 ntBASIC23.63■■□□□ 1.37
Ubr1O70481 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 AC134329.2-201ENSMUST00000217897 428 ntBASIC23.63■■□□□ 1.37
Ubr1O70481 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ubr1O70481 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
Ubr1O70481 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr1O70481 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr1O70481 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr1O70481 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ubr1O70481 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr1O70481 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr1O70481 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC23.62■■□□□ 1.37
Ubr1O70481 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ubr1O70481 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Ubr1O70481 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 Gm10418-201ENSMUST00000100943 576 ntBASIC23.61■■□□□ 1.37
Ubr1O70481 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
Ubr1O70481 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ubr1O70481 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC23.6■■□□□ 1.37
Ubr1O70481 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC23.6■■□□□ 1.37
Ubr1O70481 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.6■■□□□ 1.37
Ubr1O70481 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC23.6■■□□□ 1.37
Ubr1O70481 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Ubr1O70481 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ubr1O70481 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC23.59■■□□□ 1.37
Ubr1O70481 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ubr1O70481 Gm7370-201ENSMUST00000219471 767 ntBASIC23.59■■□□□ 1.37
Ubr1O70481 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Ubr1O70481 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.59■■□□□ 1.37
Ubr1O70481 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr1O70481 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr1O70481 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.58■■□□□ 1.37
Ubr1O70481 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr1O70481 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ubr1O70481 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC23.58■■□□□ 1.37
Ubr1O70481 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Ubr1O70481 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Ubr1O70481 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr1O70481 Gm10459-201ENSMUST00000202708 1155 ntBASIC23.57■■□□□ 1.36
Ubr1O70481 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr1O70481 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr1O70481 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Ubr1O70481 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ubr1O70481 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Ubr1O70481 Gm7367-201ENSMUST00000057611 492 ntBASIC23.57■■□□□ 1.36
Ubr1O70481 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC23.56■■□□□ 1.36
Ubr1O70481 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC23.56■■□□□ 1.36
Ubr1O70481 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ubr1O70481 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC23.55■■□□□ 1.36
Ubr1O70481 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC23.55■■□□□ 1.36
Ubr1O70481 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC23.55■■□□□ 1.36
Ubr1O70481 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.55■■□□□ 1.36
Ubr1O70481 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ubr1O70481 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr1O70481 Gm33142-201ENSMUST00000193913 867 ntBASIC23.54■■□□□ 1.36
Ubr1O70481 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr1O70481 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Ubr1O70481 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms