Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SgceO70258 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SgceO70258 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.13■□□□□ 0.17
SgceO70258 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SgceO70258 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.13■□□□□ 0.17
SgceO70258 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgceO70258 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SgceO70258 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.12■□□□□ 0.17
SgceO70258 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.12■□□□□ 0.17
SgceO70258 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SgceO70258 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.12■□□□□ 0.17
SgceO70258 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SgceO70258 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SgceO70258 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.11■□□□□ 0.17
SgceO70258 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.11■□□□□ 0.17
SgceO70258 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgceO70258 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SgceO70258 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.11■□□□□ 0.17
SgceO70258 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.1■□□□□ 0.17
SgceO70258 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SgceO70258 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SgceO70258 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SgceO70258 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.1■□□□□ 0.17
SgceO70258 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.1■□□□□ 0.17
SgceO70258 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgceO70258 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SgceO70258 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.09■□□□□ 0.17
SgceO70258 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.09■□□□□ 0.17
SgceO70258 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.09■□□□□ 0.17
SgceO70258 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.09■□□□□ 0.17
SgceO70258 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.09■□□□□ 0.17
SgceO70258 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Gm6365-201ENSMUST00000054711 744 ntBASIC16.09■□□□□ 0.17
SgceO70258 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SgceO70258 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SgceO70258 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SgceO70258 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SgceO70258 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.08■□□□□ 0.16
SgceO70258 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.08■□□□□ 0.16
SgceO70258 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.08■□□□□ 0.16
SgceO70258 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.08■□□□□ 0.16
SgceO70258 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SgceO70258 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.07■□□□□ 0.16
SgceO70258 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SgceO70258 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms