Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cacna1bO55017 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1bO55017 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.42■□□□□ 0.38
Cacna1bO55017 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.41■□□□□ 0.38
Cacna1bO55017 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cacna1bO55017 Gm2274-201ENSMUST00000184539 609 ntBASIC17.41■□□□□ 0.38
Cacna1bO55017 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cacna1bO55017 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.4■□□□□ 0.38
Cacna1bO55017 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cacna1bO55017 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Cacna1bO55017 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.39■□□□□ 0.38
Cacna1bO55017 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.39■□□□□ 0.38
Cacna1bO55017 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.39■□□□□ 0.38
Cacna1bO55017 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1bO55017 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Cacna1bO55017 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1bO55017 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cacna1bO55017 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1bO55017 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Cacna1bO55017 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.39■□□□□ 0.37
Cacna1bO55017 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Cacna1bO55017 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.39■□□□□ 0.37
Cacna1bO55017 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cacna1bO55017 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Gm22697-201ENSMUST00000175194 63 ntBASIC17.38■□□□□ 0.37
Cacna1bO55017 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.38■□□□□ 0.37
Cacna1bO55017 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cacna1bO55017 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
Cacna1bO55017 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cacna1bO55017 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cacna1bO55017 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cacna1bO55017 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.37■□□□□ 0.37
Cacna1bO55017 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.37■□□□□ 0.37
Cacna1bO55017 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.37■□□□□ 0.37
Cacna1bO55017 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cacna1bO55017 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cacna1bO55017 Gm17661-201ENSMUST00000170317 270 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms