Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.22■□□□□ 0.67
Kcnu1O54982 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.22■□□□□ 0.67
Kcnu1O54982 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Kcnu1O54982 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Kcnu1O54982 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Kcnu1O54982 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Kcnu1O54982 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Kcnu1O54982 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.21■□□□□ 0.67
Kcnu1O54982 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.21■□□□□ 0.67
Kcnu1O54982 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Gm6211-202ENSMUST00000167849 925 ntBASIC19.21■□□□□ 0.67
Kcnu1O54982 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Kcnu1O54982 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Kcnu1O54982 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
Kcnu1O54982 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Kcnu1O54982 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Kcnu1O54982 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.2■□□□□ 0.66
Kcnu1O54982 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Kcnu1O54982 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Kcnu1O54982 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Kcnu1O54982 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.19■□□□□ 0.66
Kcnu1O54982 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Kcnu1O54982 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Kcnu1O54982 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Gm13148-201ENSMUST00000118892 745 ntBASIC19.18■□□□□ 0.66
Kcnu1O54982 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Kcnu1O54982 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.17■□□□□ 0.66
Kcnu1O54982 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.17■□□□□ 0.66
Kcnu1O54982 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.17■□□□□ 0.66
Kcnu1O54982 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Kcnu1O54982 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Kcnu1O54982 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm7290-201ENSMUST00000104990 617 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm12918-201ENSMUST00000120234 636 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm15710-201ENSMUST00000121821 636 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm27405-201ENSMUST00000184201 112 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm5075-201ENSMUST00000196916 622 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.16■□□□□ 0.66
Kcnu1O54982 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.16■□□□□ 0.66
Kcnu1O54982 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Kcnu1O54982 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms