Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Banf1O54962 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Gm6420-201ENSMUST00000193885 723 ntBASIC18.38■□□□□ 0.53
Banf1O54962 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.38■□□□□ 0.53
Banf1O54962 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.38■□□□□ 0.53
Banf1O54962 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Banf1O54962 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Banf1O54962 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.37■□□□□ 0.53
Banf1O54962 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.37■□□□□ 0.53
Banf1O54962 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Banf1O54962 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Banf1O54962 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Banf1O54962 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.36■□□□□ 0.53
Banf1O54962 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Banf1O54962 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Banf1O54962 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.35■□□□□ 0.53
Banf1O54962 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.35■□□□□ 0.53
Banf1O54962 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.35■□□□□ 0.53
Banf1O54962 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Banf1O54962 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.35■□□□□ 0.53
Banf1O54962 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.34■□□□□ 0.53
Banf1O54962 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.34■□□□□ 0.53
Banf1O54962 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.34■□□□□ 0.53
Banf1O54962 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.34■□□□□ 0.53
Banf1O54962 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.34■□□□□ 0.53
Banf1O54962 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Banf1O54962 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Banf1O54962 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Banf1O54962 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Banf1O54962 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Banf1O54962 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Banf1O54962 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Banf1O54962 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Banf1O54962 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Banf1O54962 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.33■□□□□ 0.52
Banf1O54962 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Banf1O54962 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Banf1O54962 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Banf1O54962 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms