Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ChkaO54804 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ChkaO54804 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ChkaO54804 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ChkaO54804 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.22■□□□□ 0.51
ChkaO54804 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
ChkaO54804 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.22■□□□□ 0.51
ChkaO54804 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.22■□□□□ 0.51
ChkaO54804 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ChkaO54804 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ChkaO54804 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ChkaO54804 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ChkaO54804 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChkaO54804 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ChkaO54804 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.21■□□□□ 0.51
ChkaO54804 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ChkaO54804 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ChkaO54804 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ChkaO54804 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ChkaO54804 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.21■□□□□ 0.51
ChkaO54804 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ChkaO54804 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ChkaO54804 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ChkaO54804 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.19■□□□□ 0.5
ChkaO54804 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ChkaO54804 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ChkaO54804 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ChkaO54804 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.18■□□□□ 0.5
ChkaO54804 Gm8495-201ENSMUST00000188740 694 ntBASIC18.18■□□□□ 0.5
ChkaO54804 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 AV356131-201ENSMUST00000206201 750 ntBASIC18.18■□□□□ 0.5
ChkaO54804 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ChkaO54804 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ChkaO54804 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.18■□□□□ 0.5
ChkaO54804 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ChkaO54804 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.17■□□□□ 0.5
ChkaO54804 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ChkaO54804 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ChkaO54804 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ChkaO54804 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.16■□□□□ 0.5
ChkaO54804 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.16■□□□□ 0.5
ChkaO54804 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
ChkaO54804 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ChkaO54804 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.16■□□□□ 0.5
ChkaO54804 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms