Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Gm30025-201ENSMUST00000218555 728 ntBASIC16.83■□□□□ 0.28
Sh2d1bO35324 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1bO35324 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1bO35324 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1bO35324 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1bO35324 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh2d1bO35324 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.82■□□□□ 0.28
Sh2d1bO35324 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Gm6433-201ENSMUST00000118634 875 ntBASIC16.82■□□□□ 0.28
Sh2d1bO35324 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sh2d1bO35324 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh2d1bO35324 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d1bO35324 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.8■□□□□ 0.28
Sh2d1bO35324 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh2d1bO35324 Gm7977-201ENSMUST00000193787 748 ntBASIC16.8■□□□□ 0.28
Sh2d1bO35324 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1bO35324 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Sh2d1bO35324 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh2d1bO35324 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.8■□□□□ 0.28
Sh2d1bO35324 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh2d1bO35324 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Gm10517-202ENSMUST00000192970 758 ntBASIC16.78■□□□□ 0.28
Sh2d1bO35324 Gm43799-201ENSMUST00000201845 579 ntBASIC16.78■□□□□ 0.28
Sh2d1bO35324 Gm4974-201ENSMUST00000209974 875 ntBASIC16.78■□□□□ 0.28
Sh2d1bO35324 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.78■□□□□ 0.28
Sh2d1bO35324 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sh2d1bO35324 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sh2d1bO35324 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms