Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Gm12896-201ENSMUST00000118430 226 ntBASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Dio3-201ENSMUST00000097228 1449 ntBASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Tnfrsf11aO35305 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Zfp783-201ENSMUST00000095946 670 ntBASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.49■□□□□ 0.71
Tnfrsf11aO35305 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Gm38285-201ENSMUST00000192928 922 ntBASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Mtag2-201ENSMUST00000058665 714 ntBASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.48■□□□□ 0.71
Tnfrsf11aO35305 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Gm11927-201ENSMUST00000118472 759 ntBASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tnfrsf11aO35305 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Gm27275-201ENSMUST00000184318 272 ntBASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Gm2559-201ENSMUST00000201323 363 ntBASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnfrsf11aO35305 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnfrsf11aO35305 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Gm11249-201ENSMUST00000117071 859 ntBASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.44■□□□□ 0.7
Tnfrsf11aO35305 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Flg-201ENSMUST00000050758 1488 ntBASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnfrsf11aO35305 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms