Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tnfsf11O35235 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Gm8969-201ENSMUST00000199694 526 ntBASIC14.09□□□□□ -0.15
Tnfsf11O35235 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.09□□□□□ -0.15
Tnfsf11O35235 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.08□□□□□ -0.15
Tnfsf11O35235 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf11O35235 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf11O35235 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf11O35235 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf11O35235 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tnfsf11O35235 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tnfsf11O35235 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.07□□□□□ -0.16
Tnfsf11O35235 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.07□□□□□ -0.16
Tnfsf11O35235 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tnfsf11O35235 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.06□□□□□ -0.16
Tnfsf11O35235 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.06□□□□□ -0.16
Tnfsf11O35235 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.06□□□□□ -0.16
Tnfsf11O35235 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Tnfsf11O35235 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms