Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col15a1O35206 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC23.29■■□□□ 1.32
Col15a1O35206 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Gm2274-201ENSMUST00000184539 609 ntBASIC23.28■■□□□ 1.32
Col15a1O35206 Gm33142-201ENSMUST00000193913 867 ntBASIC23.28■■□□□ 1.32
Col15a1O35206 Gm4974-201ENSMUST00000209974 875 ntBASIC23.28■■□□□ 1.32
Col15a1O35206 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Col15a1O35206 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.28■■□□□ 1.32
Col15a1O35206 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col15a1O35206 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC23.27■■□□□ 1.32
Col15a1O35206 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC23.27■■□□□ 1.32
Col15a1O35206 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Col15a1O35206 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Col15a1O35206 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Col15a1O35206 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col15a1O35206 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.27■■□□□ 1.31
Col15a1O35206 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Col15a1O35206 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC23.27■■□□□ 1.31
Col15a1O35206 Gm9694-201ENSMUST00000193347 1189 ntBASIC23.27■■□□□ 1.31
Col15a1O35206 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Col15a1O35206 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
Col15a1O35206 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.26■■□□□ 1.31
Col15a1O35206 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.26■■□□□ 1.31
Col15a1O35206 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col15a1O35206 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col15a1O35206 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Col15a1O35206 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC23.26■■□□□ 1.31
Col15a1O35206 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Col15a1O35206 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col15a1O35206 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC23.25■■□□□ 1.31
Col15a1O35206 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col15a1O35206 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC23.25■■□□□ 1.31
Col15a1O35206 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC23.25■■□□□ 1.31
Col15a1O35206 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Col15a1O35206 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC23.24■■□□□ 1.31
Col15a1O35206 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC23.24■■□□□ 1.31
Col15a1O35206 AC134329.2-201ENSMUST00000217897 428 ntBASIC23.24■■□□□ 1.31
Col15a1O35206 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col15a1O35206 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Col15a1O35206 BC021767-201ENSMUST00000126387 1716 ntBASIC23.23■■□□□ 1.31
Col15a1O35206 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Col15a1O35206 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC23.23■■□□□ 1.31
Col15a1O35206 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC23.23■■□□□ 1.31
Col15a1O35206 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col15a1O35206 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Col15a1O35206 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col15a1O35206 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Gm37820-201ENSMUST00000194021 2147 ntBASIC23.22■■□□□ 1.31
Col15a1O35206 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col15a1O35206 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.21■■□□□ 1.31
Col15a1O35206 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Col15a1O35206 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC23.21■■□□□ 1.31
Col15a1O35206 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 AC154471.1-201ENSMUST00000224418 436 ntBASIC23.21■■□□□ 1.31
Col15a1O35206 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Col15a1O35206 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col15a1O35206 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms