Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trav13d-3J3QMG8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Rab3c-203ENSMUST00000224180 967 ntBASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav13d-3J3QMG8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Gm44549-201ENSMUST00000208351 577 ntBASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav13d-3J3QMG8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13d-3J3QMG8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Rarb-207ENSMUST00000225921 2756 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm5408-201ENSMUST00000197998 747 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm10602-201ENSMUST00000098239 609 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13d-3J3QMG8 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Gm2399-201ENSMUST00000104944 225 ntBASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13d-3J3QMG8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms