Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Nkx1-1G3UXB3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Gm27702-201ENSMUST00000184512 56 ntBASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Nkx1-1G3UXB3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkx1-1G3UXB3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Gm10052-201ENSMUST00000168019 960 ntBASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Mir1668-201ENSMUST00000184114 107 ntBASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Gm38313-201ENSMUST00000191953 1266 ntBASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Gm7729-201ENSMUST00000050143 801 ntBASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx1-1G3UXB3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nkx1-1G3UXB3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx1-1G3UXB3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Gm29107-201ENSMUST00000190910 347 ntBASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Gm10702-201ENSMUST00000098929 1268 ntBASIC20.5■□□□□ 0.87
Nkx1-1G3UXB3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.49■□□□□ 0.87
Nkx1-1G3UXB3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Gm5264-201ENSMUST00000190584 848 ntBASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Gm43575-201ENSMUST00000196420 516 ntBASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx1-1G3UXB3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx1-1G3UXB3 Gm25318-201ENSMUST00000122554 314 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms