Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NpcdF8VQB8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NpcdF8VQB8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NpcdF8VQB8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NpcdF8VQB8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NpcdF8VQB8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NpcdF8VQB8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.71■■□□□ 1.07
NpcdF8VQB8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
NpcdF8VQB8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NpcdF8VQB8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.7■■□□□ 1.06
NpcdF8VQB8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NpcdF8VQB8 Gm43353-201ENSMUST00000199224 1295 ntBASIC21.7■■□□□ 1.06
NpcdF8VQB8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NpcdF8VQB8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.7■■□□□ 1.06
NpcdF8VQB8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NpcdF8VQB8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.69■■□□□ 1.06
NpcdF8VQB8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Gm7153-201ENSMUST00000117092 455 ntBASIC21.69■■□□□ 1.06
NpcdF8VQB8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Gm25925-201ENSMUST00000158314 306 ntBASIC21.69■■□□□ 1.06
NpcdF8VQB8 Gm28033-201ENSMUST00000184224 96 ntBASIC21.69■■□□□ 1.06
NpcdF8VQB8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.69■■□□□ 1.06
NpcdF8VQB8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NpcdF8VQB8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Gm27704-201ENSMUST00000185094 107 ntBASIC21.68■■□□□ 1.06
NpcdF8VQB8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.68■■□□□ 1.06
NpcdF8VQB8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.68■■□□□ 1.06
NpcdF8VQB8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.67■■□□□ 1.06
NpcdF8VQB8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NpcdF8VQB8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NpcdF8VQB8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NpcdF8VQB8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.65■■□□□ 1.06
NpcdF8VQB8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NpcdF8VQB8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NpcdF8VQB8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NpcdF8VQB8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NpcdF8VQB8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms