Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Ccdc141E9Q8Q6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Ccdc141E9Q8Q6 Gm13401-201ENSMUST00000117074 291 ntBASIC27.37■■□□□ 1.97
Ccdc141E9Q8Q6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Mir1668-201ENSMUST00000184114 107 ntBASIC27.36■■□□□ 1.97
Ccdc141E9Q8Q6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 Gm13474-201ENSMUST00000122466 815 ntBASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ccdc141E9Q8Q6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gm7638-201ENSMUST00000121348 967 ntBASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gm9013-201ENSMUST00000132939 882 ntBASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gm24841-201ENSMUST00000158676 357 ntBASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ccdc141E9Q8Q6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Gm17807-201ENSMUST00000186869 298 ntBASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Gm21559-201ENSMUST00000220638 855 ntBASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Gm8587-201ENSMUST00000076538 843 ntBASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Ccdc141E9Q8Q6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Gm27704-201ENSMUST00000185094 107 ntBASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Gm29518-201ENSMUST00000190858 372 ntBASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ccdc141E9Q8Q6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Gm7461-201ENSMUST00000058918 827 ntBASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC27.31■■□□□ 1.96
Ccdc141E9Q8Q6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 Gm17808-201ENSMUST00000200859 894 ntBASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ccdc141E9Q8Q6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Gm18669-201ENSMUST00000216049 778 ntBASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ccdc141E9Q8Q6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ccdc141E9Q8Q6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ccdc141E9Q8Q6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
Ccdc141E9Q8Q6 Gm27389-201ENSMUST00000183622 195 ntBASIC27.26■■□□□ 1.96
Ccdc141E9Q8Q6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Ccdc141E9Q8Q6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Gm45906-201ENSMUST00000208911 1430 ntBASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Gm37820-201ENSMUST00000194021 2147 ntBASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Gm10418-201ENSMUST00000100943 576 ntBASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Gm7153-201ENSMUST00000117092 455 ntBASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
Ccdc141E9Q8Q6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC27.25■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms