Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Gm10812-201ENSMUST00000099864 546 ntBASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb9E9Q5G2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Mir2861-201ENSMUST00000175539 82 ntBASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Mir6349-201ENSMUST00000184059 97 ntBASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.28■■□□□ 1
Pcdhb9E9Q5G2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb9E9Q5G2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb9E9Q5G2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.27■□□□□ 0.99
Pcdhb9E9Q5G2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb9E9Q5G2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Gm18025-201ENSMUST00000221733 862 ntBASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb9E9Q5G2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb9E9Q5G2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Gm42545-201ENSMUST00000202755 922 ntBASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb9E9Q5G2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhb9E9Q5G2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb9E9Q5G2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb9E9Q5G2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms