Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rnf213E9Q555 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rnf213E9Q555 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rnf213E9Q555 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rnf213E9Q555 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Rnf213E9Q555 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC8.81□□□□□ -1
Rnf213E9Q555 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Rnf213E9Q555 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC8.81□□□□□ -1
Rnf213E9Q555 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
Rnf213E9Q555 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Gm18733-201ENSMUST00000173950 856 ntBASIC8.81□□□□□ -1
Rnf213E9Q555 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC8.81□□□□□ -1
Rnf213E9Q555 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rnf213E9Q555 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rnf213E9Q555 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC8.8□□□□□ -1
Rnf213E9Q555 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC8.8□□□□□ -1
Rnf213E9Q555 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC8.8□□□□□ -1
Rnf213E9Q555 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC8.8□□□□□ -1
Rnf213E9Q555 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC8.8□□□□□ -1
Rnf213E9Q555 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC8.8□□□□□ -1
Rnf213E9Q555 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rnf213E9Q555 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC8.8□□□□□ -1
Rnf213E9Q555 Gm18195-201ENSMUST00000207604 706 ntBASIC8.8□□□□□ -1
Rnf213E9Q555 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rnf213E9Q555 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC8.79□□□□□ -1
Rnf213E9Q555 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC8.79□□□□□ -1
Rnf213E9Q555 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Gm2651-201ENSMUST00000203560 838 ntBASIC8.79□□□□□ -1
Rnf213E9Q555 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rnf213E9Q555 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rnf213E9Q555 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rnf213E9Q555 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC8.79□□□□□ -1
Rnf213E9Q555 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC8.79□□□□□ -1
Rnf213E9Q555 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rnf213E9Q555 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rnf213E9Q555 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Gm14057-201ENSMUST00000120631 482 ntBASIC8.78□□□□□ -1
Rnf213E9Q555 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rnf213E9Q555 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC8.78□□□□□ -1
Rnf213E9Q555 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC8.78□□□□□ -1
Rnf213E9Q555 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Rnf213E9Q555 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Gm27702-201ENSMUST00000184512 56 ntBASIC8.78□□□□□ -1
Rnf213E9Q555 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC8.78□□□□□ -1
Rnf213E9Q555 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rnf213E9Q555 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms