Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Mir1199-201ENSMUST00000117015 119 ntBASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh17E9PXF0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Zfp783-201ENSMUST00000095946 670 ntBASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh17E9PXF0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdh17E9PXF0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Mtag2-201ENSMUST00000058665 714 ntBASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh17E9PXF0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh17E9PXF0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdh17E9PXF0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms