Protein–RNA interactions for Protein: E9PUZ9

Pdzrn4, PDZ domain-containing RING finger 4, mousemouse

Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn4E9PUZ9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdzrn4E9PUZ9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pdzrn4E9PUZ9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdzrn4E9PUZ9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pdzrn4E9PUZ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pdzrn4E9PUZ9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 AA414768-201ENSMUST00000121924 1257 ntBASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.29■□□□□ 0.84
Pdzrn4E9PUZ9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Gm10013-201ENSMUST00000106074 672 ntBASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pdzrn4E9PUZ9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Gm14859-201ENSMUST00000117752 357 ntBASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Gm42545-201ENSMUST00000202755 922 ntBASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pdzrn4E9PUZ9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pdzrn4E9PUZ9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdzrn4E9PUZ9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pdzrn4E9PUZ9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pdzrn4E9PUZ9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pdzrn4E9PUZ9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Gm37292-201ENSMUST00000192062 758 ntBASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pdzrn4E9PUZ9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pdzrn4E9PUZ9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms