Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Hfm1D3Z4R1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Gm29518-201ENSMUST00000190858 372 ntBASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Hfm1D3Z4R1 Gm15853-202ENSMUST00000195518 2041 ntBASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Gm9013-201ENSMUST00000132939 882 ntBASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Mir1668-201ENSMUST00000184114 107 ntBASIC25.53■■□□□ 1.68
Hfm1D3Z4R1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hfm1D3Z4R1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Gm7638-201ENSMUST00000121348 967 ntBASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Gm17807-201ENSMUST00000186869 298 ntBASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Gm7461-201ENSMUST00000058918 827 ntBASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Hfm1D3Z4R1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hfm1D3Z4R1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Hfm1D3Z4R1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC25.49■■□□□ 1.67
Hfm1D3Z4R1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC25.49■■□□□ 1.67
Hfm1D3Z4R1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Hfm1D3Z4R1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Hfm1D3Z4R1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Gm24841-201ENSMUST00000158676 357 ntBASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Gm18669-201ENSMUST00000216049 778 ntBASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Hfm1D3Z4R1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Hfm1D3Z4R1 Gm17808-201ENSMUST00000200859 894 ntBASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Gm27389-201ENSMUST00000183622 195 ntBASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Hfm1D3Z4R1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Hfm1D3Z4R1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Hfm1D3Z4R1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC25.45■■□□□ 1.66
Hfm1D3Z4R1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms