Protein–RNA interactions for Protein: D3YUK0

Gm3259, Predicted gene 3259, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3259D3YUK0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm3259D3YUK0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3259D3YUK0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm3259D3YUK0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Gm13148-201ENSMUST00000118892 745 ntBASIC18.08■□□□□ 0.48
Gm3259D3YUK0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm3259D3YUK0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Mir5133-201ENSMUST00000174955 77 ntBASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm3259D3YUK0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Gm37179-201ENSMUST00000194862 823 ntBASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm3259D3YUK0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.05■□□□□ 0.48
Gm3259D3YUK0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Gm12933-201ENSMUST00000120203 872 ntBASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Gm26524-201ENSMUST00000192339 390 ntBASIC18.04■□□□□ 0.48
Gm3259D3YUK0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm3259D3YUK0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms