Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Gm3375-201ENSMUST00000203929 796 ntBASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptchd4B9EKX1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ptchd4B9EKX1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.44■□□□□ 0.7
Ptchd4B9EKX1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ptchd4B9EKX1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Gm10231-201ENSMUST00000181584 441 ntBASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Gm10175-202ENSMUST00000208752 441 ntBASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.42■□□□□ 0.7
Ptchd4B9EKX1 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ptchd4B9EKX1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Gm13559-201ENSMUST00000120476 863 ntBASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ptchd4B9EKX1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms