Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp42B2RQC2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Mtag2-201ENSMUST00000058665 714 ntBASIC21.18■□□□□ 0.98
Usp42B2RQC2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp42B2RQC2 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.18■□□□□ 0.98
Usp42B2RQC2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp42B2RQC2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.18■□□□□ 0.98
Usp42B2RQC2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Usp42B2RQC2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.17■□□□□ 0.98
Usp42B2RQC2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.17■□□□□ 0.98
Usp42B2RQC2 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.17■□□□□ 0.98
Usp42B2RQC2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp42B2RQC2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Usp42B2RQC2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.16■□□□□ 0.98
Usp42B2RQC2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp42B2RQC2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp42B2RQC2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp42B2RQC2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Usp42B2RQC2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Usp42B2RQC2 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.14■□□□□ 0.97
Usp42B2RQC2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp42B2RQC2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Gm10653-202ENSMUST00000139570 835 ntBASIC21.13■□□□□ 0.97
Usp42B2RQC2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.13■□□□□ 0.97
Usp42B2RQC2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.13■□□□□ 0.97
Usp42B2RQC2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp42B2RQC2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Usp42B2RQC2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.12■□□□□ 0.97
Usp42B2RQC2 Trmt13-210ENSMUST00000198454 880 ntBASIC21.12■□□□□ 0.97
Usp42B2RQC2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp42B2RQC2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.11■□□□□ 0.97
Usp42B2RQC2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.11■□□□□ 0.97
Usp42B2RQC2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp42B2RQC2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp42B2RQC2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms