Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col6a5A6H584 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.69□□□□□ -0.22
Col6a5A6H584 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Col6a5A6H584 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a5A6H584 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Col6a5A6H584 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.68□□□□□ -0.22
Col6a5A6H584 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Gm32051-202ENSMUST00000197905 2385 ntBASIC13.68□□□□□ -0.22
Col6a5A6H584 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.68□□□□□ -0.22
Col6a5A6H584 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.68□□□□□ -0.22
Col6a5A6H584 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Col6a5A6H584 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col6a5A6H584 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a5A6H584 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.67□□□□□ -0.22
Col6a5A6H584 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col6a5A6H584 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a5A6H584 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.67□□□□□ -0.22
Col6a5A6H584 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.67□□□□□ -0.22
Col6a5A6H584 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Col6a5A6H584 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.67□□□□□ -0.22
Col6a5A6H584 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col6a5A6H584 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col6a5A6H584 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.66□□□□□ -0.22
Col6a5A6H584 Gm6736-201ENSMUST00000166583 948 ntBASIC13.66□□□□□ -0.22
Col6a5A6H584 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Gm45328-201ENSMUST00000210942 917 ntBASIC13.66□□□□□ -0.22
Col6a5A6H584 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Col6a5A6H584 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col6a5A6H584 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Col6a5A6H584 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col6a5A6H584 Gm11452-201ENSMUST00000122376 690 ntBASIC13.66□□□□□ -0.22
Col6a5A6H584 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.66□□□□□ -0.22
Col6a5A6H584 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.66□□□□□ -0.22
Col6a5A6H584 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a5A6H584 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col6a5A6H584 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a5A6H584 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.64□□□□□ -0.23
Col6a5A6H584 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.64□□□□□ -0.23
Col6a5A6H584 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a5A6H584 Rps4l-201ENSMUST00000071745 943 ntBASIC13.64□□□□□ -0.23
Col6a5A6H584 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms