Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Krt28A6BLY7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.08■□□□□ 0.8
Krt28A6BLY7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Krt28A6BLY7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt28A6BLY7 Gm28033-201ENSMUST00000184224 96 ntBASIC20.07■□□□□ 0.8
Krt28A6BLY7 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.07■□□□□ 0.8
Krt28A6BLY7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt28A6BLY7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt28A6BLY7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Krt28A6BLY7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm13474-201ENSMUST00000122466 815 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm27389-201ENSMUST00000183622 195 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm17807-201ENSMUST00000186869 298 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gm5587-201ENSMUST00000206270 674 ntBASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt28A6BLY7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Krt28A6BLY7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.04■□□□□ 0.8
Krt28A6BLY7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Krt28A6BLY7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Gm7153-201ENSMUST00000117092 455 ntBASIC20.03■□□□□ 0.8
Krt28A6BLY7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Gm21559-201ENSMUST00000220638 855 ntBASIC20.03■□□□□ 0.8
Krt28A6BLY7 Gm8587-201ENSMUST00000076538 843 ntBASIC20.03■□□□□ 0.8
Krt28A6BLY7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt28A6BLY7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Krt28A6BLY7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Gm44771-201ENSMUST00000206975 626 ntBASIC20.02■□□□□ 0.8
Krt28A6BLY7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Gm4974-201ENSMUST00000209974 875 ntBASIC20.02■□□□□ 0.8
Krt28A6BLY7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt28A6BLY7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Krt28A6BLY7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt28A6BLY7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt28A6BLY7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt28A6BLY7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Gm9013-201ENSMUST00000132939 882 ntBASIC20.01■□□□□ 0.79
Krt28A6BLY7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Krt28A6BLY7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms