Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.19■□□□□ 0.02
Col6a4A2AX52 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a4A2AX52 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.18■□□□□ 0.02
Col6a4A2AX52 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.18■□□□□ 0.02
Col6a4A2AX52 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Gm7461-201ENSMUST00000058918 827 ntBASIC15.18■□□□□ 0.02
Col6a4A2AX52 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.18■□□□□ 0.02
Col6a4A2AX52 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a4A2AX52 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Mir6349-201ENSMUST00000184059 97 ntBASIC15.17■□□□□ 0.02
Col6a4A2AX52 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.17■□□□□ 0.02
Col6a4A2AX52 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.17■□□□□ 0.02
Col6a4A2AX52 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
Col6a4A2AX52 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.17■□□□□ 0.02
Col6a4A2AX52 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a4A2AX52 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Gm25016-201ENSMUST00000158399 131 ntBASIC15.16■□□□□ 0.02
Col6a4A2AX52 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.16■□□□□ 0.02
Col6a4A2AX52 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a4A2AX52 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.15■□□□□ 0.02
Col6a4A2AX52 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a4A2AX52 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Gm38027-201ENSMUST00000192315 235 ntBASIC15.14■□□□□ 0.01
Col6a4A2AX52 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Col6a4A2AX52 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms