Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Scn1aA2APX8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Gm43183-201ENSMUST00000200632 547 ntBASIC19■□□□□ 0.63
Scn1aA2APX8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Scn1aA2APX8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scn1aA2APX8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scn1aA2APX8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.99■□□□□ 0.63
Scn1aA2APX8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scn1aA2APX8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.98■□□□□ 0.63
Scn1aA2APX8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn1aA2APX8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn1aA2APX8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.98■□□□□ 0.63
Scn1aA2APX8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.97■□□□□ 0.63
Scn1aA2APX8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn1aA2APX8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn1aA2APX8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.96■□□□□ 0.63
Scn1aA2APX8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Scn1aA2APX8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1aA2APX8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Scn1aA2APX8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1aA2APX8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1aA2APX8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn1aA2APX8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn1aA2APX8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.94■□□□□ 0.62
Scn1aA2APX8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn1aA2APX8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn1aA2APX8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms