Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.61□□□□□ -0.87
Ubr4A2AN08 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ubr4A2AN08 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ubr4A2AN08 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gm20634-201ENSMUST00000090779 2956 ntBASIC9.6□□□□□ -0.87
Ubr4A2AN08 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gm12350-201ENSMUST00000121208 462 ntBASIC9.6□□□□□ -0.87
Ubr4A2AN08 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 AC124569.2-201ENSMUST00000225998 818 ntBASIC9.6□□□□□ -0.87
Ubr4A2AN08 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ubr4A2AN08 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Ighv6-1-201ENSMUST00000193612 343 ntBASIC9.59□□□□□ -0.87
Ubr4A2AN08 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Gm19094-201ENSMUST00000209791 1246 ntBASIC9.59□□□□□ -0.87
Ubr4A2AN08 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Mir6349-201ENSMUST00000184059 97 ntBASIC9.59□□□□□ -0.87
Ubr4A2AN08 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC9.59□□□□□ -0.87
Ubr4A2AN08 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.59□□□□□ -0.87
Ubr4A2AN08 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ubr4A2AN08 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 AC154266.1-201ENSMUST00000223190 503 ntBASIC9.58□□□□□ -0.88
Ubr4A2AN08 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ubr4A2AN08 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Mir6420-201ENSMUST00000185032 102 ntBASIC9.57□□□□□ -0.88
Ubr4A2AN08 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC9.57□□□□□ -0.88
Ubr4A2AN08 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms