Protein–RNA interactions for Protein: A2AH22

Ambra1, Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1A2AH22 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Gm10418-201ENSMUST00000100943 576 ntBASIC21.79■■□□□ 1.08
Ambra1A2AH22 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.79■■□□□ 1.08
Ambra1A2AH22 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.79■■□□□ 1.08
Ambra1A2AH22 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ambra1A2AH22 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.78■■□□□ 1.08
Ambra1A2AH22 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Ambra1A2AH22 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Gm28033-201ENSMUST00000184224 96 ntBASIC21.78■■□□□ 1.08
Ambra1A2AH22 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.78■■□□□ 1.08
Ambra1A2AH22 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ambra1A2AH22 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ambra1A2AH22 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Gm29518-201ENSMUST00000190858 372 ntBASIC21.77■■□□□ 1.07
Ambra1A2AH22 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Ambra1A2AH22 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.76■■□□□ 1.07
Ambra1A2AH22 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Gm27389-201ENSMUST00000183622 195 ntBASIC21.76■■□□□ 1.07
Ambra1A2AH22 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ambra1A2AH22 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ambra1A2AH22 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.75■■□□□ 1.07
Ambra1A2AH22 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ambra1A2AH22 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.73■■□□□ 1.07
Ambra1A2AH22 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ambra1A2AH22 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.73■■□□□ 1.07
Ambra1A2AH22 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Gm13401-201ENSMUST00000117074 291 ntBASIC21.73■■□□□ 1.07
Ambra1A2AH22 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.73■■□□□ 1.07
Ambra1A2AH22 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.73■■□□□ 1.07
Ambra1A2AH22 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ambra1A2AH22 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ambra1A2AH22 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ambra1A2AH22 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.72■■□□□ 1.07
Ambra1A2AH22 Il3ra-202ENSMUST00000223589 738 ntBASIC21.72■■□□□ 1.07
Ambra1A2AH22 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ambra1A2AH22 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ambra1A2AH22 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Ambra1A2AH22 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.71■■□□□ 1.07
Ambra1A2AH22 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ambra1A2AH22 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Gm17807-201ENSMUST00000186869 298 ntBASIC21.71■■□□□ 1.07
Ambra1A2AH22 Gm18669-201ENSMUST00000216049 778 ntBASIC21.71■■□□□ 1.07
Ambra1A2AH22 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ambra1A2AH22 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms