Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap99A0A140LIX9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cfap99A0A140LIX9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cfap99A0A140LIX9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Gm13158-201ENSMUST00000122007 736 ntBASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.58■■□□□ 1.05
Cfap99A0A140LIX9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cfap99A0A140LIX9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Cfap99A0A140LIX9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cfap99A0A140LIX9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cfap99A0A140LIX9 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.58■■□□□ 1.04
Cfap99A0A140LIX9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Mir1199-201ENSMUST00000117015 119 ntBASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cfap99A0A140LIX9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cfap99A0A140LIX9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cfap99A0A140LIX9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gm15565-201ENSMUST00000118890 427 ntBASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gm37055-201ENSMUST00000191866 133 ntBASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cfap99A0A140LIX9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.53■■□□□ 1.04
Cfap99A0A140LIX9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms