Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm8520-201ENSMUST00000186517 868 ntBASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-4A0A0G2JG01 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav13n-4A0A0G2JG01 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm13148-201ENSMUST00000118892 745 ntBASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-4A0A0G2JG01 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm6211-202ENSMUST00000167849 925 ntBASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Gm12527-201ENSMUST00000117967 564 ntBASIC14.6□□□□□ -0.07
Trav13n-4A0A0G2JG01 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms