Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav11A0A0B4J1J9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav11A0A0B4J1J9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gm11421-201ENSMUST00000122124 294 ntBASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav11A0A0B4J1J9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav11A0A0B4J1J9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav11A0A0B4J1J9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav11A0A0B4J1J9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.4□□□□□ -0.43
Trav11A0A0B4J1J9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav11A0A0B4J1J9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Gm12251-201ENSMUST00000117893 792 ntBASIC12.39□□□□□ -0.43
Trav11A0A0B4J1J9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms