Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm26833-201ENSMUST00000180899 440 ntBASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm8969-201ENSMUST00000199694 526 ntBASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv1A0A0B4J1G7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv1A0A0B4J1G7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm43017-201ENSMUST00000198296 752 ntBASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv1A0A0B4J1G7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.15□□□□□ -0.14
Trbv1A0A0B4J1G7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv1A0A0B4J1G7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms