Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm28557A0A087WQQ0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm28557A0A087WQQ0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm28557A0A087WQQ0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Gm43017-201ENSMUST00000198296 752 ntBASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm28557A0A087WQQ0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm28557A0A087WQQ0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Gm28557A0A087WQQ0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28557A0A087WQQ0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
Gm28557A0A087WQQ0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm28557A0A087WQQ0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm28557A0A087WQQ0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms