Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Rab3c-203ENSMUST00000224180 967 ntBASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav6-4A0A075B6B4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6-4A0A075B6B4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Gm26524-201ENSMUST00000192339 390 ntBASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-4A0A075B6B4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-4A0A075B6B4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Trav6-4A0A075B6B4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Gm44549-201ENSMUST00000208351 577 ntBASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trav6-4A0A075B6B4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6-4A0A075B6B4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms