Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6n-7A0A075B6A6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav6n-7A0A075B6A6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav6n-7A0A075B6A6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav6n-7A0A075B6A6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Trav6n-7A0A075B6A6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav6n-7A0A075B6A6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6n-7A0A075B6A6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav6n-7A0A075B6A6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm2559-201ENSMUST00000201323 363 ntBASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav6n-7A0A075B6A6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6n-7A0A075B6A6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Flg-201ENSMUST00000050758 1488 ntBASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav6n-7A0A075B6A6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms